jobarchitect
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  • Architect jobs for running analyses
  • Defining jobs using CWL
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jobarchitect
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Index

A | C | D | G | H | I | J | M | O | P | R | S | T

A

  • Agent (class in jobarchitect.agent)
  • analyse_by_identifiers() (in module jobarchitect.agent)

C

  • cli() (in module jobarchitect.agent)

D

  • dataset_path (jobarchitect.backends.JobSpec attribute)

G

  • generate_bash_job() (in module jobarchitect.backends)
  • generate_docker_job() (in module jobarchitect.backends)
  • generate_jobspecs() (in module jobarchitect.sketchjob)
  • generate_singularity_job() (in module jobarchitect.backends)

H

  • hash_ids (jobarchitect.backends.JobSpec attribute)

I

  • image_name (jobarchitect.backends.JobSpec attribute)

J

  • jobarchitect (module)
  • jobarchitect.agent (module)
  • jobarchitect.backends (module)
  • jobarchitect.sketchjob (module)
  • jobarchitect.utils (module)
  • JobSketcher (class in jobarchitect.sketchjob)
  • JobSpec (class in jobarchitect.backends)

M

  • mkdir_parents() (in module jobarchitect.utils)

O

  • output_path_from_hash() (in module jobarchitect.utils)
  • output_root (jobarchitect.backends.JobSpec attribute)

P

  • path_from_hash() (in module jobarchitect.utils)

R

  • render_script() (in module jobarchitect.backends)
  • run_tool_on_identifier() (jobarchitect.agent.Agent method)

S

  • sketch() (jobarchitect.sketchjob.JobSketcher method)
  • sketchjob() (in module jobarchitect.sketchjob)
  • split_dataset() (in module jobarchitect.utils)

T

  • tool_path (jobarchitect.backends.JobSpec attribute)

© Copyright 2015, Tjelvar Olsson. Revision a51c8934.

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